Our research program encompasses three main directions:
Systems neuroscience, Signal processing, Neural Coding
Neural circuits receive many inputs, either from the outside world or from sensors encoding the current state of the organism. These inputs range from internal states such as satiety and proprioception, to external factors such as touch and food level. This multi-dimensional information needs to be compressed to reduce the signal complexity and to eventually drive a coherent behavioral output. One likely spot where such compression happens are neural bottleneck - those are circuits where many inputs are mapped to much fewer neurons and then expand again to signal to many outputs. We use an anatomical bottleneck in C. elegans to study the principles behind information flow in neural bottlenecks.
Animal behavior, Motor coordination, Control theory
To effectively interact with an environment, different behaviors need to be temporally coordinated. How animals are able to coordinate multiple behaviors into complex action sequences is an open question in neuroscience. In the worm C. elegans the neural basis of behavioral coordination can be investigated using foraging behavior which is essential for the survival of an animal. Foraging behavior relies on the coupling of locomotion and feeding to effectively seek out resource rich areas and exploit them. Both feeding and locomotion have been studied separately, but due to the range of time and length scales involved, their coordination has not been examined. Much of this coordination act via neuromodulators, which work extrasynaptically to coordinate circuits. We ask how the pharyngeal and locomotory circuits are coupled by dopamine, serotonin and how predatory nematode regulate their behaviors.
Machine-learning, agent-based models, Simulations
Using rich behavioral and neuronal data, we develop models to predict behavioral states and classify underlying modulatory dynamics. We also use agent-based models to investigate effective foraging, and circuit level models to study the underlying computation. We also collaborate with theoretical colleagues from the BaBOTS project to understand how collective behaviors are implemented.
I am interested in understanding principles of information coding in simple neural networks.
I build optical tools to investigate neural coding in worms.
I use molecular tools to label neurons in the worm.
I study how stimuli are encoded in a neural bottleneck.
I study the neural bottleneck in a predatory nematode, Pristionchus pacificus.
I study odor integration and how pre-emptive pumps enhance the effective foraging of C. elegans.
I develop and maintain tracking microscope software.
I work on food learning and memory.
Güniz Goze Eren, Leonard Böger, Marianne Roca, Fumie Hiramatsu, Jun Liu, Luis Alvarez, Desiree Goetting, Nurit Zorn, Ziduan Han, Misako Okumura, Monika Scholz & James W. Lightfoot
Jun Liu, Elsa Bonnard and Monika Scholz
Elsa Bonnard, Jun Liu, Nicolina Zjacic, Luis Alvarez and Monika Scholz
Nicolina Zjacic and Monika Scholz
M Scholz, AN Linder, F Randi, AK Sharma, X Yu, JW Shaevitz, A Leifer